Julius/semesterproject_lecture_eeg
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Edited some comments

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Julius Voggesberger
2021-03-28 15:45:14 +02:00
parent bb3406bd88
commit cfa950b85b
5 changed files with 45 additions and 20 deletions
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2
utils/file_utils.py
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@@ -18,7 +18,7 @@ def load_bad_annotations(filepath, fileending="badSegments.csv"):
def load_preprocessed_data(subject, dataset):
"""
Load the raw object as well as the annotations of the preprocessed file
Load the raw object of the preprocessed file
:param subject: The subject, for which we want to load the raw object
:param dataset: The currently viewed dataset
:param selected_subjects: The manually preprocessed subjects

23
utils/plot_utils.py
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@@ -58,7 +58,8 @@ def plot_grand_average(dataset):
def plot_tf_cluster(F, clusters, cluster_p_values, freqs, times):
"""
Plot teh F-Statistic values of permutation clusters with p-values <= 0.05 in color and > 0.05 in grey.
Plot the F-Statistic values of permutation clusters with p-values <= 0.05 in color and > 0.05 in grey.
Currently only works well for the linear scaling. For the logarithmic scaling a different x-axis has to be chosen
:param F: F-Statistics of the permutation clusters
:param clusters: all permutation clusters
@@ -81,9 +82,19 @@ def plot_tf_cluster(F, clusters, cluster_p_values, freqs, times):
def plot_oscillation_bands(condition):
"""
Plot the oscillation bands for a given condition in the time from 130ms to 200ms
:param condition: the condition to plot the oscillation bands for
"""
fig, axis = plt.subplots(1, 5, figsize=(25, 5))
condition.plot_topomap(baseline=(-0.2, 0), fmin=0, fmax=4, title='Delta', axes=axis[0], show=False, vmin=0, vmax=1.5, tmin=0, tmax=1)
condition.plot_topomap(baseline=(-0.2, 0), fmin=4, fmax=8, title='Theta', axes=axis[1], show=False, vmin=0, vmax=0.7, tmin=0, tmax=1)
condition.plot_topomap(baseline=(-0.2, 0), fmin=8, fmax=12, title='Alpha', axes=axis[2], show=False, vmin=-0.15, vmax=0.2, tmin=0, tmax=1)
condition.plot_topomap(baseline=(-0.2, 0), fmin=13, fmax=30, title='Beta', axes=axis[3], show=False, vmin=-0.18, vmax=0.2, tmin=0, tmax=1)
condition.plot_topomap(baseline=(-0.2, 0), fmin=30, fmax=45, title='Gamma', axes=axis[4], vmin=0, vmax=0.2, tmin=0, tmax=1)
condition.plot_topomap(baseline=(-0.2, 0), fmin=0, fmax=4, title='Delta', axes=axis[0], show=False, vmin=0,
vmax=1.5, tmin=0.13, tmax=0.2)
condition.plot_topomap(baseline=(-0.2, 0), fmin=4, fmax=8, title='Theta', axes=axis[1], show=False, vmin=0,
vmax=0.7, tmin=0.13, tmax=0.2)
condition.plot_topomap(baseline=(-0.2, 0), fmin=8, fmax=12, title='Alpha', axes=axis[2], show=False, vmin=-0.25,
vmax=0.2, tmin=0.13, tmax=0.2)
condition.plot_topomap(baseline=(-0.2, 0), fmin=13, fmax=30, title='Beta', axes=axis[3], show=False, vmin=-0.21,
vmax=0.2, tmin=0.13, tmax=0.2)
condition.plot_topomap(baseline=(-0.2, 0), fmin=30, fmax=45, title='Gamma', axes=axis[4], vmin=-0.05, vmax=0.2,
tmin=0.13,
tmax=0.2)